Publications

  • Kaori Watanabe, Yasutetsu Kanaoka, Shoko Mizutani, Hironobu Uchiyama, Shunsuke Yajima, Masayoshi Watada, Tadashi Uemura,* and Yukako Hattori.*

Interspecies comparative analyses reveal distinct carbohydrate-responsive systems among Drosophila species. Cell Reports, Volume 28, ISSUE 10, P2594-2607.e7, September 03, 2019 * Corresponding authors (2019).

  • Yasutetsu Kanaoka†, Henrik Skibbe†, Yusaku Hayashi, *Tadashi Uemura and *Yukako Hattori.

DeTerm: Software for automatic detection of neuronal dendritic branch terminals via an artificial neural network. Genes to Cells, Jul;24(7):464-472 †Equal contribution * Corresponding authors (2019).

  • Kinjo T, Terai K, Horita S, Nomura N, Sumiyama K, Togashi K, Iwata S, Matsuda, M.

FRET-assisted photoactivation of flavoproteins for in vivo two-photon optogenetics. Nat Methods. (2019). 

 

  • Terai K, Imanishi A, Li C, Matsuda M. 

Two decades of genetically encoded biosensors based on Forster resonance energy transfer. Cell Struct Funct. (2019).

  • Risa Sueda, Itaru Imayoshi, Yukiko Harima and Ryoichiro Kageyama.

High Hes1 expression and resultant Ascl1 suppression regulate quiescent vs. active neural stem cells in the adult mouse brain. Gene Dev, 33, 1-13, (2019).

  • Honda Naoki, Ryutaro Akiyama, Dini Wahyu Kartika Sari, Shin Ishii, Yasumasa Bessho, Takaaki Matsui.

Noise-resistant developmental reproducibility in vertebrate somite formation. PLOS Computational Biology, 15(2):e1006579, (2019).

  • Yamada, M, Suzuki, Y, Nagasaki,SC, Okuno, H, Imayoshi, I.

Light Control of the Tet Gene Expression System in Mammalian Cells. Cell Reports, 25 pp487-500, (2018)

  • Isomura A, Kageyama R.

An Optogenetic Method to Control and Analyze Gene Expression Patterns in Cell-to-cell Interactions. J Vis Exp. (133) doi: 10.3791/57149, (2018).

 

  • Matsumiya M, Tomita T, Yoshioka-Kobayashi K, Isomura A, Kageyama R.

ES cell-derived presomitic mesoderm-like tissues for analysis of synchronized oscillations in the segmentation clock. Development.145(4), (2018).

  • Koji Kikuchi, Akira Nakamura, Masaki Arata, Dongbo Shi, Mami Nakagawa, Tsubasa Tanaka, Tadashi Uemura, Toshihiko Fujimori, Akira Kikuchi, Akiyoshi Uezu, Yasuhisa Sakamoto, and Hiroyuki Nakanishi.

Map7/7D1 and Dvl form a feedback loop that facilitates microtubule remodeling and Wnt5a signaling. EMBO reports, e45471 (2018).

  • Perron, A., Nishikawa, Y., Iwata, J., Shimojo, H., Takaya, J., Kobayashi, K., Imayoshi, I., Mbenza, N.M., Takenoya, M., Kageyama, R., Kodama, Y. and Uesugi, M.

Small-molecule screening yields a compound that inhibits the cancer-associated transcription factor Hes1 via the PHB2 chaperone. J Biol Chem, 293, 8285-8294, (2018)

 

  • Li, W.L., Chu, M.W., Wu, A., Suzuki, Y., *Imayoshi, I. and *Komiyama T.

Adult-born neurons facilitate olfactory bulb pattern separation during task engagement. eLife, 7, e33006, (2018).

 

  • Kaneko, R., Takatsuru, Y., Morita, A., Amano, I., Haijima, A., Imayoshi, I., Tamamaki, N., Koibuchi, N., Watanabe, M. and Yanagawa, Y.

Inhibitory neuron-specific Cre-dependent red fluorescent labeling using VGAT BAC-based transgenic mouse lines with identified transgene integration sites. J Comp Neurol, 526, 373-396, (2018).

 

  • Naoki Komatsu, Kenta Terai, Ayako Imanishi, Yuji Kamioka, Kenta Sumiyama, Takashi Jin, Yasushi Okada, Takeharu Nagai & Michiyuki Matsuda

A platform of BRET-FRET hybrid biosensors for optogenetics, chemical screening, and in vivo imaging.Scientific Reports, 8, 8984, (2018)

 

  • Imanishi A, Murata T, Sato M, Hotta K, Imayoshi I, Matsuda M, Terai K. 

A novel morphological marker for the analysis of molecular activities at the single-cell level. 
Cell Struct Funct. 43(2), (2018)

  • Yu Muta, Yoshihisa Fujita, Kenta Sumiyama, Atsuro Sakurai, M. Mark Taketo, Tsutomu Chiba, Hiroshi Seno, Kazuhiro Aoki, Michiyuki Matsuda & Masamichi Imajo

Composite regulation of ERK activity dynamics underlying tumor-specific traits in the intestine.Nature Communications, 9, (2018)

  • Yamaguchi S, Honda N, Ikeda M, Tsukada Y, Nakano S, Mori I and Ishii S.

Identification of animal behavioral strategies by inverse reinforcement learning.
PLoS Computational Biology, 14(5): e1006122 (2018)

  • Maryu G, Miura H, Uda Y, Komatsubara TA, Matsuda M, Aoki K.    

Live-cell Imaging with Genetically Encoded Protein Kinase Activity Reporters. Cell Struct Funct. 43(1), (2018).

 

CONTACT >

EMAIL: sysbio.office[at]lif.kyoto-u.ac.jp
TEL: 075-753-9450
FAX: 075-753-4698

 

ACCESS >

〒606-8501

F Bldg, Medicine Campus,

Yoshida-konoe-cho, Sakyo-ku, Kyoto
京都府京都市左京区吉田近衛町
京都大学医学部構内F棟1階

Copyright © 2018 Research Center for Dynamic Living Systems  生命動態研究センター  All Rights Reserved.